Protein Folding Protocols
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Protein Folding Protocols

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Description

Covering experiment and theory, bioinformatics approaches, and state-of-the-art simulation protocols for better sampling of the conformational space, this volume describes a broad range of techniques to study, predict, and analyze the protein folding process. Protein Folding Protocols also provides sample approaches toward the prediction of protein structure starting from the amino acid sequence, in the absence of overall homologous sequences.show more

Product details

  • Hardback | 328 pages
  • 157.5 x 233.7 x 25.4mm | 567g
  • Humana Press Inc.
  • Totowa, NJ, United States
  • English
  • 2006 ed.
  • 111 Illustrations, black and white; XIV, 328 p. 111 illus.
  • 1588296229
  • 9781588296221

Back cover copy

Protein Folding Protocols presents protocols for studying and characterizing protein folding from the unfolded to the folded state. Covering experiment and theory, bioinformatics approaches, and state-of-the-art simulation protocols for better sampling of the conformational space, this volume describes a broad range of techniques to study, predict, and analyze the protein folding process. Protein Folding Protocols also provides sample approaches toward the prediction of protein structure starting from the amino acid sequence, in the absence of overall homologous sequences. These approaches have tremendous implications, ranging from drug design, functional assignment, comprehension of the nature of regulation, understanding molecular machines, viral entry into cells, and putting together cellular pathways and their dynamics.show more

Review quote

"...great value to graduate students and researchers who would like to learn about modern techniques to probe protein folding events." -Journal of American Chemical Societyshow more

Table of contents

Infrared Temperature-Jump Study of the Folding Dynamics of a-Helices and b-Hairpins Feng Gai, Deguo Du, and Yao Xu The Use of High-Pressure Nuclear Magnetic Resonance to Study Protein Folding Michael W. Lassalle and Kazuyuki Akasaka Characterization of Denatured Proteins Using Residual Dipolar Couplings Erika B. Gebel and David Shortle Characterizing Residual Structure in Disordered Protein States Using Nuclear Magnetic Resonance David Eliezer Population and Structure Determination of Hidden Folding, Intermediates by Native-State Hydrogen Exchange-Directed Protein Engineering and Nuclear Magnetic Resonance Yawen Bai, Hanqiao Feng, and Zheng Zhou Characterizing Protein Folding Transition States Using Y-Analysis Adarsh D. Pandit, Bryan A. Krantz, Robin S. Dothager, and Tobin R. Sosnick Advances in the Analysis of Conformational Transitions in Peptides Using Differential Scanning Calorimetry Werner W. Streicher and George I. Makhatadze Application of Single Molecule Forster Resonance Energy Transfer to Protein Folding Benjamin Schuler Single Molecule Studies of Protein Folding Using Atomic Force Microscopy Sean P. Ng, Lucy G. Randles, and Jane Clarke Using Triplet-Triplet Energy Transfer to Measure Conformational Dynamics in Polypeptide Chains Beat Fierz, Karin Joder, Florian Krieger, and Thomas Kiefhaber A Hierarchical Protein Folding Scheme Based on the Building Block Folding Model Nurit Haspel, Gilad Wainreb, Yuval Inbar, Hui-Hsu (Gavin) Tsai, Chung-Jung Tsai, Haim J. Wolfson, and Ruth Nussinov Replica Exchange Molecular Dynamics Method for Protein Folding Simulation Ruhong Zhou Estimation of Folding Probabilities and F Values From Molecular Dynamics Simulations of Reversible Peptide Folding Francesco Rao, Giovanni Settanni, and Amedeo Caflisch PackingRegularities in Biological Structures Relate to Their Dynamics Robert L. Jernigan and Andrzej Kloczkowski Intermediates and Transition States in Protein Folding D. Thirumalai and Dmitri K. Klimov Thinking the Impossible: How to Solve the Protein Folding Problem With and Without Homologous Structures and Morem Rita Casadio, Piero Fariselli, Pier Luigi Martelli, and Gianluca Tasco Indexshow more

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